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Julian Liber
Julian Liber
Julian Liber
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qPCR - Bonito Lab Training
15:25
3 года назад
Endpoint PCR - Bonito Lab Training
11:01
4 года назад
Комментарии
@0yodelingpickle526
@0yodelingpickle526 День назад
You should NOT be ringing your yarn like that - spin it in a lettuce spinner. Ringing it stretches it which is not good, especially for wet wool.
@erikawerner
@erikawerner 2 месяца назад
Thanks for the interesting video. Are you from the San Diego area? Your Name sounds familiar .
@Gwenny89
@Gwenny89 2 месяца назад
Will it stay purple after long years of sun exposure?
@julianliber4633
@julianliber4633 2 месяца назад
@@Gwenny89 it will fade gradually with sun exposure. Unfortunately most naturally-derived pigments are less colorfast than synthetic ones.
@Bearfoot-e3e
@Bearfoot-e3e 2 месяца назад
I always knew this lichen was special. Although, ammonia is not something I like to mess with. Pokeberries make purple too.
@tawseefalaff9976
@tawseefalaff9976 2 месяца назад
Is the isopropanol ice cold or room temparatyre
@julianliber4633
@julianliber4633 2 месяца назад
@@tawseefalaff9976 I typically chill it for this protocol, but if it's at room temperature then you can likely put it in the freezer for 1 or 2 minutes longer.
@tawseefalaff9976
@tawseefalaff9976 2 месяца назад
@@julianliber4633 Thank you so much
@modo5091
@modo5091 2 месяца назад
Hello thanks for your video, i am now fermenting my own! will this colour fade in sunlight?
@elizabethannegrey6285
@elizabethannegrey6285 2 месяца назад
Absolutely mesmerised. Thank you for this video, and your dedication to keeping an ancient craft alive.
@cheezyasf
@cheezyasf 3 месяца назад
Does it need to be heated ?
@julianliber4633
@julianliber4633 3 месяца назад
Yes, I believe so. It is possible that the dyeing will work offer a long time at low temperature, but I haven't tested that.
@LK1zt
@LK1zt 3 месяца назад
I added lime of milk. Does this affect the target product?
@julianliber4633
@julianliber4633 3 месяца назад
Is that in addition to ammonia or instead of it? Raising the pH generally makes the color more purple but otherwise shouldn't effect the dyeing.
@LK1zt
@LK1zt 3 месяца назад
@@julianliber4633 I added it during fermentation
@julianliber4633
@julianliber4633 3 месяца назад
@@LK1zt as long as there is plenty of ammonia and oxygen, it should be fine!
@LK1zt
@LK1zt 3 месяца назад
@@julianliber4633 Thank you for your feedback. Have a good day
@hiteshipant7300
@hiteshipant7300 3 месяца назад
Thankyou sir ❤
@pietervandijk9480
@pietervandijk9480 3 месяца назад
Is there a need to (pre)mordant, or is there enough tannins in the lichen? If there is a need for premordant, what would give the best effect for purple?
@julianliber4633
@julianliber4633 3 месяца назад
No need to pre-mordant. Not sure of the exact reason, but the dye will bind without a mordant present.
@christineg8151
@christineg8151 3 месяца назад
Gorgeous! My MIL was cleaning graves on Memorial Day this year and i asked her to save any lichen she found. I was expecting some of the xanthoria lichens because she described it as bright yellow-green, but instead she brought back nearly a quart of this! Looking forward to trying it out.
@user-fd3wl1pr7s
@user-fd3wl1pr7s 4 месяца назад
you should have a rack under the glass jar - like they do with canning.
@delynndehardt1859
@delynndehardt1859 5 месяцев назад
It is a beautiful color, but you'd have to collect & use a LOT of lichen for just 1 garment.
@julianliber4633
@julianliber4633 5 месяцев назад
After a decent windstorm, I was able to collect enough lichen to fill a 1 L jar, which then provided dye for about 400 or 500 g of wool. It will take time, but the lichen gives more pigment than expected!
@jeanstevens2305
@jeanstevens2305 5 месяцев назад
GREAT ! You show us pictures of the lichen and how to test it.
@naturalwitchery
@naturalwitchery 6 месяцев назад
GREAT video!
@jatinhemnani6111
@jatinhemnani6111 6 месяцев назад
How do u prevent scraping agar while removing mycelium from plate The fungi im working on has very flat colony
@merrivideo
@merrivideo Месяц назад
I'm having the same issue. How did you solve it?
@high.on.matcha
@high.on.matcha 6 месяцев назад
great video
@caucasianrugs
@caucasianrugs 6 месяцев назад
is it lightfast?
@julianliber4633
@julianliber4633 6 месяцев назад
I've noticed fading after regular wear in sunny weather after about 6-8 weeks. The color becomes less intense, but retains its hue.
@ellenmorris6915
@ellenmorris6915 7 месяцев назад
Last summer, I made this according to your directions and it worked great! Trying it again and after three weeks I have what looks like grape juice colored solution. My question is: How do I know when it's ready?
@julianliber4633
@julianliber4633 7 месяцев назад
Awesome! I think the longer you let it go, the deeper the color for a given amount of liquid. I'm also not sure at which point the lichen is exhausted.
@ellenmorris6915
@ellenmorris6915 7 месяцев назад
(This is a new batch from lichen gathered over the summer.)
@julianliber4633
@julianliber4633 7 месяцев назад
@@ellenmorris6915 if it's like a deep purple grape juice, then you're probably ready to go!
@linhtrang6456
@linhtrang6456 7 месяцев назад
Thank you Julian
@hanavesela5884
@hanavesela5884 7 месяцев назад
This is amazing. I never heard of this process. Thanks for sharing.
@svetlananana9609
@svetlananana9609 8 месяцев назад
💜💜💜💜Yaaay I love the color purple and almost exclusively wear only that. Thank you:) am exciting to go through the process soon
@jefflangat6052
@jefflangat6052 8 месяцев назад
No enzymatic digestion, no incubatiom on water bath. Just addind ctab and cloroform and thats it????. I doubt it
@kapilramar2253
@kapilramar2253 8 месяцев назад
Which kind of malt extract use Diastatic or non diastatic
@julianliber4633
@julianliber4633 8 месяцев назад
It's just being used for sugars and will be autoclaved, so it doesn't matter. However, I use dry bacteriological malt extract which is presumably non-diastatic due to heat treatment.
@SilencedByYoutube
@SilencedByYoutube 9 месяцев назад
I'm pouring in a still air box. Can I leave the lids off the same way until the agar cools or will there be a risk of contamination? I don't have a flow hood.
@julianliber4633
@julianliber4633 9 месяцев назад
You should keep the lids on in that case. There will be more condensation, but it's not a problem.
@SilencedByYoutube
@SilencedByYoutube 9 месяцев назад
@@julianliber4633 thanks
@allison5446
@allison5446 9 месяцев назад
I have looked everywhere for a "soup to nuts" method of using lichen as a die and you have done it! I also live on the east coast and I thought that the lichen that I had collected was the common Green Shield (Flavoparmelia caperata) but your instructions on using a drop of bleach verified what I had initially thought was Punctelia rudecta. Yay! Purples!!! I love your step by step directions from harvesting, removal from bark, and the beginning to the end of the dying process. Thank you so much for an incredibly informative video! A++ !
@lisascenic
@lisascenic 9 месяцев назад
What an astonishing color! Is it colorfast?
@sandrascotland3639
@sandrascotland3639 6 месяцев назад
That's what I want to know
@shirinpayizova8768
@shirinpayizova8768 9 месяцев назад
Awesome, thank you for informationz
@onceuponatablecloth
@onceuponatablecloth 9 месяцев назад
I have a question. I started fermenting lichen and now realize I have so much more than I need. Will it keep longer than 6 months if I leave it in the jar? If I want to keep it longer should I strain out the lichen and boil the dye before saving it for later. Thanks for the info in the video so far. My wood pile was covered in the stuff and I got a bit overexcited, which is why I now have way more dye than I need at a time.
@julianliber4633
@julianliber4633 9 месяцев назад
I've had my jars for 3 years now, still works great!
@onceuponatablecloth
@onceuponatablecloth 9 месяцев назад
did you strain out the lichen, or just leave it as is? @@julianliber4633
@jorgecarrascof.2025
@jorgecarrascof.2025 9 месяцев назад
Hi Julian. I have had failed DNA extractions. Using the lysis buffer composed 100 mM Tris, 250 mM KCl, and 10 mM disodium EDTA (pH 9.5). The samples in tube PCR to 95°C for 10 min and then mixed with 40 ul BSA 3%. I tested in a electrophoresis the DNA and apparently there is no DNA and in PCR I can´t see amplicons. The fungal tested in my case were Beauveria, Metarhizium, Diplodia and Clonostachys. Considering your experience what is the probably problem ??
@julianliber4633
@julianliber4633 9 месяцев назад
Hi, you can't usually see the DNA on a gel prior to PCR due to the low concentration. How do you do your PCR? I have success using 0.5 ul of template in a 10 ul rxn, with GoTaq green master mix, primers ITS1f & LR3 at 500 nM, and a cycle of 95C/3min, 35x(95C/30s, 57C/30s, 72C/90s), 72C/7min. I've seen that too few cycles can result in failure to see PCR products.
@jeancastro1600
@jeancastro1600 10 месяцев назад
Thanks for the protocol. Could you mention the code of the BSA solution you used or did you prepare it from powder?
@julianliber4633
@julianliber4633 10 месяцев назад
I prepared from powder, and the protocol has worked in both labs I have worked in so the supplier probably isn't important.
@jeancastro1600
@jeancastro1600 10 месяцев назад
@@julianliber4633 Thanks for the quick reply, could you please indicate whether you used PBS? did you sterilize the solution and how; did you use previously sterilized PBS and then dissolve the BSA? Thanks
@julianliber4633
@julianliber4633 10 месяцев назад
@@jeancastro1600 because the first solution is buffered, I dissolve the BSA in PCR-grade water then filter sterilize with a low-binding 0.22 um filter.
@matiasguerrap.5456
@matiasguerrap.5456 10 месяцев назад
@@julianliber4633What was the pH of BSA?
@denisemottley22705
@denisemottley22705 Год назад
Very beautiful shade. 💜
@Medietos
@Medietos Год назад
Beautiful! Is it the Stone-Lichen I used to make a beautiful rich reddish-Brown colour, with chemicals Alun and vinsten (Sw)? For this fine purple: No further chemicals needed for permanence?
@julianliber4633
@julianliber4633 Год назад
No mordant is needed! You can get the color with the lichen dye alone.
@PromorteD
@PromorteD Год назад
Very useful thank you. Confirmed that all of my seeds were indeed unviable!!
@FranOnTheEdge
@FranOnTheEdge Год назад
Would it be possible to make ink with lichen like this? And if so must it smell of ammonia? How would you turn it into an ink?
@julianliber4633
@julianliber4633 Год назад
It seems like French Purple is made this way. There's a comment that explains more.
@momentobooks
@momentobooks Год назад
I collected lots of lichen on fallen trees on my propety, and it had been soaking in water and ammonia for 2 months now, and no sign of purple at the moment. The liquid is dark brown with some dark red hues, but it yields some uninteresting brownish dirty tone. Do you think it will really turn purple in a couple more months or it should have already started to look like purple is on the way?
@julianliber4633
@julianliber4633 Год назад
It's possible that it will turn purple, which happens faster with oxidation. Do you open the jar for air?
@momentobooks
@momentobooks Год назад
@@julianliber4633 Yes, once in a while but I will do it more often to see if it changes anything. Thanks!
@julianliber4633
@julianliber4633 Год назад
@@momentobooks it's also possible that it might not be a lecanoric acid containing lichen. If you have some more of it you can try to scratch off the outer layer to reveal the white cortex, then put a drop of concentrated bleach on that spot. If it turns red, it probably is a lichen that will work to make the dye.
@momentobooks
@momentobooks Год назад
@@julianliber4633 Oh! this would explain it! I put a couple different lichen in the jar.
@mdhasibulhossain6389
@mdhasibulhossain6389 Год назад
Can you please share any reference of this protocol? I want to cite this method. Thanks.
@julianliber4633
@julianliber4633 Год назад
You can cite this paper: peerj.com/articles/12701 Liber JA, Minier DH, Stouffer-Hopkins A, Van Wyk J, Longley R, Bonito G. Maple and hickory leaf litter fungal communities reflect pre-senescent leaf communities. PeerJ. 2022 Jan 27;10:e12701. doi: 10.7717/peerj.12701. PMID: 35127279; PMCID: PMC8801177.
@ZygoArachnid
@ZygoArachnid Год назад
Thank you for this tutorial! It was very fascinating!
@shirellejohnson1387
@shirellejohnson1387 Год назад
I wonder if it would work as a hair tones
@julianliber4633
@julianliber4633 Год назад
L'Oreal has a patent, so probably! patents.google.com/patent/FR2907005A1/en
@miwamo
@miwamo Год назад
Thank you for this video! I‘ve never seen such a interesting color dyeing idea from lichen. Also it’s interesting that you use to gather lichen chopsticks and a tofu package and cook it with a rice cooker😊
@nz-nz
@nz-nz Год назад
How interesting! Would be great to know how this dye was “discovered” (I.e. using the ammonia to extract the pigment).
@julianliber4633
@julianliber4633 Год назад
It's been around for a while! First urine was used, then ammonia later. en.m.wikipedia.org/wiki/Orcein
@TrudySchwartzBurrill
@TrudySchwartzBurrill Год назад
If you use any acid like citric acid it will be pink or red, is that what you said? I couldn’t hear exactly. Thanks.
@julianliber4633
@julianliber4633 Год назад
Yes, you could use citric acid or vinegar to lower the pH and get a red to pink color. The color changes if you wash the fiber in a different pH solution.
@TrudySchwartzBurrill
@TrudySchwartzBurrill Год назад
@@julianliber4633 Is that the same chemically as a plant like a hydrangea bush can grow blue flowers in low PH soil the same plant if put with high PH soil will grow pink flowers?
@julianliber4633
@julianliber4633 Год назад
@@TrudySchwartzBurrill it's similar, in that pH affects color, but the compound is different. Many pigments (natural and synthetic) are pH sensitive, and can be used as indicators. en.m.wikipedia.org/wiki/PH_indicator
@TrudySchwartzBurrill
@TrudySchwartzBurrill Год назад
@@julianliber4633 thank you for the link and information. 👍
@KOUADRI_Mohamed_Elamine
@KOUADRI_Mohamed_Elamine Год назад
i have a request please, can you show us how to extract DNA from plants infected with obligatory fungi like Rust and Smut ??
@julianliber4633
@julianliber4633 Год назад
I don't work with these fungi, but I'll see what protocols I can find.
@KOUADRI_Mohamed_Elamine
@KOUADRI_Mohamed_Elamine Год назад
@@julianliber4633 thank you so much
@ryanbiggums1431
@ryanbiggums1431 Год назад
Can i use this receipe to make liquid culture medium by doing the same thing minus the agar?
@julianliber4633
@julianliber4633 Год назад
Yep, that works too!
@kreideprinzye15
@kreideprinzye15 Год назад
You are Godsend. Thank you so much. By the way, do you have a citation for your source of protocol? thank you
@julianliber4633
@julianliber4633 Год назад
I just added it to the video description.
@sabahhassan3140
@sabahhassan3140 Год назад
This is my first time to understand I failed and failed and failed all times to grow mushroom thanks a lot
@sabahhassan3140
@sabahhassan3140 Год назад
You are successful teacher
@bcpem1
@bcpem1 Год назад
After all this I think I would rather buy some purple yarn at the store! 😅
@shirellejohnson1387
@shirellejohnson1387 Год назад
Boring
@naumankhalid8322
@naumankhalid8322 Год назад
thanks for the video. why did you make a single cutlet at the end when the whole plate is still used?
@julianliber4633
@julianliber4633 Год назад
The cutlet on the plate's lid is used to help remove bacteria from the fungal isolate. The fungus will start on the cutlet, then jump the gap to the top of the plate where it can usually be isolated without any bacterial contamination.