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Boxplot with Letters Indicating Significant Differences 

StatDOE by Rosane Rech
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One-Way ANOVA, Tukey’s test, Box Plot with ggplot
R code: statdoe.com/one-way-anova-and...
Courses: statdoe.com/courses/
0:00 Introduction
0:46 Description of the data set
1:01 Loading the libraries and the data set
1:55 Analysis of Variance - ANOVA
2:30 Tukey's test
3:10 Letters do indicate significant differences (cdl)
3:50 Table with mean, third quantile and cdl
5:05 Basic Boxplot
6:18 Customising axis titles, theme and gridlines
7:08 Adding the letters to the boxplot
8:20 Adding colours to the plot
8:45 Colouring the boxes according to the median value
Packages: ggplot2, multcompView, dplyr
Main functions: aov, TukeyHSD, multcompLetters4, summarise, ggplot, geom_boxplot, geom_text, scale_fill_brewer, theme_bw, show.legend, labs .
www.statdoe.com

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7 авг 2024

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Комментарии : 76   
@ShaphanYChia
@ShaphanYChia 2 года назад
Thank you for this great video. Very clear and easy to follow. It has helped me produce some beautiful boxplots today! Please do more!
@RosaneRech
@RosaneRech 2 года назад
Thank you! Will do!
3 года назад
Great video! I’ll put this lesson in practice right away!! Thanks again!!
@RosaneRech
@RosaneRech 3 года назад
Thanks!
@Miguel10111948
@Miguel10111948 6 месяцев назад
EXCELLENT explanations !!!
@schinkelaner93
@schinkelaner93 2 года назад
This was very helpful! Thanks a lot!
@williamkramer1494
@williamkramer1494 3 месяца назад
Great video, thank you so much!
@iaikitkuparlyngdoh3455
@iaikitkuparlyngdoh3455 2 года назад
Very neat and simple 👏👏
@veronicaguidalevich3704
@veronicaguidalevich3704 3 года назад
VERY useful!! Thank you!!
@hernanruiz1698
@hernanruiz1698 Год назад
Que hermosa profe! muchas gracias! salva una tesis
@evaldosilva786
@evaldosilva786 2 года назад
Great video, Rosane
@lauraleventhal3699
@lauraleventhal3699 Год назад
This video was so so so helpful! Thank you so much!
@RosaneRech
@RosaneRech Год назад
Glad it was helpful!
@yurymartinezcamelo3702
@yurymartinezcamelo3702 2 года назад
Excelente vídeo. Muchas gracias.
@jeremiahfoley87
@jeremiahfoley87 3 года назад
great video...thank you!
@Dhazzaneenee
@Dhazzaneenee 2 года назад
thanks for the tutorial!
@vanquinguyen1051
@vanquinguyen1051 2 года назад
Hi Rosane, could you please a video on how to add significant letters on box plot for the split-plot data with main factor and sub-factor? Thank you.
@kofiaful133
@kofiaful133 Год назад
Thanks very much
@bamideleoladapofagbayigbo7205
@bamideleoladapofagbayigbo7205 2 года назад
Great video
@motivacao100
@motivacao100 2 года назад
Muito bom. Parabéns!
@MohamedAwad-sl9mt
@MohamedAwad-sl9mt Год назад
Thank you so much!
@OlimHayot
@OlimHayot 3 месяца назад
thank a lot a beatifull skills from beatifull Lady!
@Drkarimsamir2002
@Drkarimsamir2002 Год назад
Thank you
@angvelsan2287
@angvelsan2287 2 года назад
Great video. Would be possible to do the same on a boxplot for a two way ANOVA?
@inesmontenegro897
@inesmontenegro897 Год назад
muito bem explicado
@flying_raven4505
@flying_raven4505 2 года назад
Thank you. Very helpful
@RosaneRech
@RosaneRech 2 года назад
Glad it was helpful!
@noor-ul-ain386
@noor-ul-ain386 2 года назад
Mam, you are amazing
@user-sf9wu4dc5n
@user-sf9wu4dc5n Год назад
Beautiful. Thank you
@nurinarifah9091
@nurinarifah9091 2 года назад
Amazing video! Thanks so much. I have tried using the same method for Kruskal wallis and dunn test. But couldnt get the result. Im stuck at cld. Could you please help me out with this? Thank you.
@Esther-kz9xc
@Esther-kz9xc 3 года назад
Thank you very much !!!
@RosaneRech
@RosaneRech 3 года назад
Glad it helped!
@undraamunkhuu5430
@undraamunkhuu5430 2 года назад
Thank you for useful video. Could you apply example data file?
@123arskas
@123arskas 2 года назад
Love the accent and explanation.
@RosaneRech
@RosaneRech 2 года назад
Thank you! 😃
@tibejene
@tibejene 2 года назад
Perfect! How about adding significant values to a faceted Boxplot
@user-fy7mm1yk5q
@user-fy7mm1yk5q 10 месяцев назад
Best tip
@RosaneRech
@RosaneRech 9 месяцев назад
Happy to help
@padmoreansahboateng379
@padmoreansahboateng379 3 года назад
Is it possible to do this with a Non-parametric anova and a Dunn’s test posthoc? Standing by Thanks
@tchistermorrelebissa8628
@tchistermorrelebissa8628 Год назад
Interesting. Could you demonstrate it from the raw data? dip? vjust?
@federicogarland272
@federicogarland272 2 года назад
what can I do if I have several continuous variables? The letters don't sort themselves accordingly since they are being sorted out for each variable's mean instead of the treatments.
@andrewm.nuwamanya6447
@andrewm.nuwamanya6447 2 года назад
Hi Rosane, been following closely but i somehow cant go past this error Error in UseMethod("group_by") : no applicable method for 'group_by' applied to an object of class "character" i have reached the Tk stage. Thanks
@richielicea3293
@richielicea3293 6 месяцев назад
Certainly a great video!!!! However, I'm facing some problems with plot generation. At the end of line 39 you introduce 'y=quant', what is this? When I run the function for plot, it's generated an error 'quant object not found'. I would appreciate information about it. Thanks beforehand
@thaburr
@thaburr Год назад
What if I have produced 50+ ANOVA boxplots, using GGBOXPLOT() and now I just need to add the CLD? Can I add CLD to ggboxplot? I would prefer to just go into my code and build cld/tk tables and apply those labels to my existing plot. I was able to follow along with this tutorial making a new boxplot from my dataset using this method. Great video, the best R tutorial I have seen online to date.
@RosaneRech
@RosaneRech Год назад
Thanks! I believe you can add the geom_text() to the ggboxplot(). You just need the table with the treatments and correspondent letters.
@IsraelLopez-mz7km
@IsraelLopez-mz7km 3 года назад
Hi, interesting tutorial. I'm sorry how can I understand the letters? I mean it's been a while since my last class for statistics. But I got significant differences come up from p-value, right? How can this be related to those letters? Thanks!
@RosaneRech
@RosaneRech 3 года назад
Hi Israel. Yes, the letters come from the p-value and follow two simple rules: - the highest mean receives the letter "a" - means that have no significant difference receive the same letter. You can take a look at this tutorial: ru-vid.com/video/%D0%B2%D0%B8%D0%B4%D0%B5%D0%BE-gHSe1KFTzD0.html
@paulreuben468
@paulreuben468 2 года назад
Great video and lesson. In which rstudio version does the multcompView package exist?
@RosaneRech
@RosaneRech 2 года назад
I believe you can install the multcompView package in any of the recent versions of R.
@patriciakio4595
@patriciakio4595 Год назад
@@RosaneRech ru-vid.com/video/%D0%B2%D0%B8%D0%B4%D0%B5%D0%BE-c1Hs1v61lhw.html
@chocorry
@chocorry Год назад
great video but my cld didnt appear in the table after i run the "print(tk)" :(
@yermimersonjacintogarcia78
@yermimersonjacintogarcia78 2 года назад
Tengo como errror " Error in fortify(data) : object 'Tk' not found" agradeceria su ayuda
@noor-ul-ain386
@noor-ul-ain386 2 года назад
How to make boxplot of three factor experiment ?
@ignaciozea7625
@ignaciozea7625 Год назад
How can I organize my data on my excel table?
@jyotishnakumari1235
@jyotishnakumari1235 2 года назад
Don't know how to automatically pick scale for object of type data.frame. Defaulting to continuous. Error: Aesthetics must be either length 1 or the same as the data (4): label Run `rlang::last_error()` to see where the error occurred plz resolve this error. i got this in last line
@fergahamilton3558
@fergahamilton3558 2 года назад
Hi I got the following error on the last line of code....Genotype is my x axis , everything worked perfectly, till the end...Could you give me some advice? Don't know how to automatically pick scale for object of type data.frame. Defaulting to continuous. Error in FUN(X[[i]], ...) : object 'Genotype' not found Thanks, the video was great!!
@RosaneRech
@RosaneRech 2 года назад
Hi Ferga, it is hard to debug the error without the code. Check if your x-axis - genotype - is defined as factor.
@manzyzuzajnr3508
@manzyzuzajnr3508 2 года назад
I am trying to add the letters but my R seems not to be adding them?
@kirangandhi6884
@kirangandhi6884 3 года назад
Hai it is very helpful video. I need small clarification... When I changes axis from X to Y and Y to X, the geom_boxplot (aes( fill = factor (..middle..)) argument is not functioning and I got an Error code showing object middle is not found. Please help me to fix the issue.
@RosaneRech
@RosaneRech 3 года назад
Is it working without the `aes( fill = factor (..middle..)`?
@kirangandhi6884
@kirangandhi6884 3 года назад
@@RosaneRech Yes, it is working.
@RosaneRech
@RosaneRech 3 года назад
I would have to take a look on your code to figure out what is happening.
@RosaneRech
@RosaneRech 3 года назад
I have just published the tutorial on my website, where you can copy the code to reproduce the tutorial. statdoe.com/one-way-anova-and-box-plot-in-r/ I hope it helps you in finding the error.
@kirangandhi6884
@kirangandhi6884 3 года назад
@@RosaneRech Will follow madam
@lorenzoceresa99
@lorenzoceresa99 2 года назад
This does not work with my dataset unfortunately
@javieracornejo1940
@javieracornejo1940 3 месяца назад
Thanks a lot! This tutorial is easy to follow
@jolima2045
@jolima2045 Год назад
Será que ela é francesa?
@RosaneRech
@RosaneRech Год назад
Não sou francesa :)
@jolima2045
@jolima2045 Год назад
Certo.
@md.zulfikarkhan8857
@md.zulfikarkhan8857 3 года назад
I got this Error in FUN(X[[i]], ...) : object 'quant' not found. Can you help me to solve this issue???
@williamdealmeida6960
@williamdealmeida6960 3 года назад
Me too
@RosaneRech
@RosaneRech 3 года назад
Hello, check in your Tk data if there is indeed a column called "quant". If not, check your code in the summarise function. You can find the copy de code for this tutorial at: rpubs.com/RosaneRech/OneFactorBoxplot
@RosaneRech
@RosaneRech 3 года назад
Hello, check in your Tk data if there is indeed a column called "quant". If not, check your code in the summarise function. You can find the copy de code for this tutorial at: rpubs.com/RosaneRech/OneFactorBoxplot
@md.zulfikarkhan8857
@md.zulfikarkhan8857 3 года назад
@@RosaneRech Thank you very much !!!
@fernandoseverianogaleana9509
@fernandoseverianogaleana9509 9 месяцев назад
Thank you, excellent video very helpful .
@RosaneRech
@RosaneRech 9 месяцев назад
Glad it was helpful!
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