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Creating a barplot with error bars using ggplot2 (CC088) 

Riffomonas Project
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27 окт 2024

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Комментарии : 24   
@Riffomonas
@Riffomonas 3 года назад
Be sure to check out the PLOS Biology article I mentioned. What do you think of their arguments? journals.plos.org/plosbiology/article?id=10.1371%2Fjournal.pbio.1002128
@SergioUribe
@SergioUribe 2 года назад
great tip using the ggtext for the markdown in the axis, learning a ton with your videos!
@Riffomonas
@Riffomonas 2 года назад
Thanks! I’ve really grown to love ggtext and glue for this type of stuff
@hectorsebastianarcosrobled2541
@hectorsebastianarcosrobled2541 2 года назад
I highly appreciate your tutorial, professor. My sincere gratitude for the lesson you have shared with us. Greetings from Mexico.
@Riffomonas
@Riffomonas 2 года назад
My pleasure! Thanks for watching 😊
@gracedeitzler7414
@gracedeitzler7414 3 года назад
Great video, thanks! Recently I have been thinking about how to overcome this issue with barplots in my own figures - currently I am making boxplots with geom_point overlaid to better demonstrate the distribution of the samples, but when I have figures with a lot of data points it can look a bit messy and harder to interpret. Looking forward to a future episode on bar plot alternatives!
@Riffomonas
@Riffomonas 3 года назад
Hey Grace - I agree. It isn’t easy and there’s probably no perfect choice for larger datasets ... but I think most are better than bar charts with +/- se 😂
@md.masumbillah8222
@md.masumbillah8222 2 года назад
Thanks, absolutely useful to analyze and visualize my data related to the macro faunal abundance in a lagoon system.
@Riffomonas
@Riffomonas 2 года назад
Fantastic!
@nic5958
@nic5958 3 года назад
Dude, most of my master's degree has been online due to Covid. You're helping me a great deal with these tutorials and your posts on the Mothur forum! Stoked to see what you recommend instead. Maybe errorplots?
@Riffomonas
@Riffomonas 3 года назад
Ugh, that's brutal! Glad to be able to help out. The next 3-4 episodes will be alternatives so stay tuned :)
@niceday2015
@niceday2015 2 года назад
Now I know how to fix a broken barplot.Glue it. :)THANK YOU VERY MUCH.
@Riffomonas
@Riffomonas 2 года назад
My pleasure!
@sitendugoswami1990
@sitendugoswami1990 3 года назад
Excellent tutorial the element.markdown feature is really cool and handy!
@Riffomonas
@Riffomonas 3 года назад
It's great, isn't it?! I think it's also going to be super handy for things like bacterial names on axes
@Jcakiiiii
@Jcakiiiii 2 года назад
Thank you for this!! Very informative.
@Riffomonas
@Riffomonas 2 года назад
Thanks for watching!
@gimanibe
@gimanibe Год назад
Thanks Pat. I just think that SE is not the right thing to show in dinamite plots (that already aren't a great plot for means). SE is the standard deviation of the means of samples taken form the same population, so, it is not appropriate to show the variation for 1 single (or pooled) sample. Don't you agree?
@commomscience
@commomscience Год назад
There is a space between the x axis line and bins; how to get rid of this space?
@Riffomonas
@Riffomonas Год назад
Thanks for watching! You can use expand=c(0,0) in scale_y_continuous
@niceday2015
@niceday2015 2 года назад
Totally agree with you, I do not like bar plot either. But the real problem is the original data they use, very less chance to get them even by a kind ask with an email. Open science and reproducible research is still a long way to go.
@Riffomonas
@Riffomonas 2 года назад
Baby steps!
@HanySalem
@HanySalem Год назад
great@
@kohinoorbegum2880
@kohinoorbegum2880 Год назад
Can I talk with you about my plot?
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