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Double strand break repair model 

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this DNA repair lecture explains about the Double strand break repair model. shomusbiology.com/
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shomusbiology.com/bio-materials.html
In genetics, the initial processes involved in repair of a double-strand break by synthesis-dependent strand annealing (SDSA) are identical to those in the double Holliday junction model, and have been most extensively studied in yeast species Saccharomyces cerevisiae. Following a double-stranded break, a protein complex (MRX) binds to either end of the break, working with DNA nucleases to carry out resection, resulting in 5' end digest to produce 3' overhangs of single-stranded DNA. These overhangs are then bound to form a nucleoprotein filament, which can then locate DNA sequences similar to one of the 3' overhangs, initiating a single-stranded strand invasion into the DNA duplex containing these sequences. Once strand invasion has occurred, a displacement loop, or D-loop, is formed, at which point either SDSA or a double Holliday junction occurs.[1]
Homologous recombination via the SDSA pathway occurs in both mitotic and meiotic cells as an important mechanism of non-crossover recombination, and was first suggested as a model in 1976,[2] acquiring its current name in 1994.[3] As the double Holliday junction model was the first posited in order to explain this phenomenon,[4] various versions of the SDSA model were later proposed to explain heteroduplex DNA configurations that did not match predictions of the double Holliday junction model. Studies in S. cerevisiae found that non-crossover products appear earlier than double Holliday junctions or crossover products, which challenged the previous notion that both crossover and non-crossover products are produced by double Holliday junctions.[5]
In the SDSA model, repair of double-stranded breaks occurs without the formation of a double Holliday junction, such that the two processes of homologous recombination are identical until just after D-loop formation.[6] In yeast, the D-loop is formed by strand invasion with the help of proteins Rad51 and Rad52,[7] and is then acted on by DNA helicase Srs2 to prevent formation of the double Holliday junction in order for the SDSA pathway to occur.[8] The invading 3' strand is thus extended along the recipient homologous DNA duplex by DNA polymerase in the 5' to 3' direction, such that the D-loop physically translocates -- a process referred to as bubble migration DNA synthesis.[9] The resulting single Holliday junction then slides down the DNA duplex in the same direction in a process called branch migration, displacing the extended strand from the template strand. This displaced strand pops up to form a 3' overhang in the original double-stranded break duplex, which can then anneal to the opposite end of the original break through complementary base pairing. Thus DNA synthesis fills in gaps left over from annealing, and extends both ends of the still present single stranded DNA break, ligating all remaining gaps to produce recombinant non-crossover DNA.[1]
SDSA is unique in that D-loop translocation results in conservative rather than semiconservative replication, as the first extended strand is displaced from its template strand, leaving the homologous duplex intact. Therefore, it should be noted that while SDSA produces non-crossover products due to the fact that flanking markers of heteroduplex DNA are not exchanged, gene conversion does occur, wherein nonreciprocal genetic transfer takes place between two homologous sequences.[10] Source of the article published in description is Wikipedia. I am sharing their material. © by original content developers of Wikipedia.
Link- en.wikipedia.org/wiki/Main_Page Material source: Molecular Biology of the Gene (4th Edition)
James D. Watson (Author), Alan M. Weiner (Author), Nancy H. Hopkins (Author)
Link: www.amazon.com/Molecular-Biology-Gene-4th-Edition/dp/0805396144

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26 янв 2013

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Комментарии : 53   
@palomaaguilera8315
@palomaaguilera8315 5 лет назад
I’m not a born English speaker and this is extremely understandable. Stop being idiots. Thank you very much! This helped me A LOT
@shomusbiologyofficial
@shomusbiologyofficial 5 лет назад
Thank you for backing me up.
@olinandi3100
@olinandi3100 5 лет назад
Totally love your videos! So helpful. Can't thank you enough for what you're doing for the students. You make learning very enjoyable 😇
@cinx18
@cinx18 10 лет назад
I cant thank you enough for your videos!
@shimajirjes853
@shimajirjes853 8 лет назад
I really cant thank u enough for amazing videos ...
@kalumthomson5638
@kalumthomson5638 4 года назад
Might I ask how the second DNA end (depicted at the top in your picture) is "captured" in bacteria? I know on the bottom strand that does the strand invasion to create the D loop, that RecA nucleoprotein filament facilitates the strand exchange, however if RecA is also bound on the other 3' tail, what stops this end from also invading - what allows it to pair with it's cognate strand? Also if this is a double strand break, what keeps the two (now seperate) strands together and stops them from diffusing away from each other?
@tukahamadah8547
@tukahamadah8547 4 года назад
Please i have a question, if i use the other homologous chromosome to correct the double stranded break and fill it with the missing nucleotides, this way i will be creating a break and nucleotides will be missing from the healthy correct chromosome or DNA molecule from which i took the nucleotides, isnt this right?
@sakinakachwala4326
@sakinakachwala4326 4 года назад
I request you to make a video on DSB in which you yourself are explaining it in detail..with that white board n you yourself drawing it n explaining it step by step...in that kinda video it is very easy to understand...i just watch your videos 2 timesand make my own notes and read that only and no other notes..please make this video soon sir...😊😊 N a Very Happy Teacher's day sirr..😌
@milicazivkovic4212
@milicazivkovic4212 Год назад
In crossover products- how we got little a in the first dna molecule, and big A in the one below If we cut in 1. Did they turned their positions? I am talking abot 5’ strands.
@komaldiptianandmaisuriya4301
@komaldiptianandmaisuriya4301 3 года назад
ty so much sir for teaching so well , we understand and remember , god bless
@shomusbiologyofficial
@shomusbiologyofficial 3 года назад
You're welcome. Glad to hear that you're getting benefit from my lectures
@saraanwer1066
@saraanwer1066 6 лет назад
When you say welcome friends.. I feel so honored to be a friend of u sir 🙋🙆
@naomimankrado8510
@naomimankrado8510 6 лет назад
wow ,i finally understand resolving holliday junctions
@shomusbiologyofficial
@shomusbiologyofficial 6 лет назад
+Naomi Mankrado glad it helped
@savannahgillam6008
@savannahgillam6008 6 лет назад
pronunciation is fine!! thanks for your help!
@catchersalazar705
@catchersalazar705 4 года назад
Only good video on this I could find... and if you 'can't understand him' even though he's speaking fine, just turn on the closed captions...
@shomusbiologyofficial
@shomusbiologyofficial 4 года назад
Thank you. Glad you liked my lectures
@tennesonandrews7919
@tennesonandrews7919 7 лет назад
great job bro, next time please prefer board.
@ankitachowdhury5268
@ankitachowdhury5268 5 лет назад
What a lecture
@shomusbiologyofficial
@shomusbiologyofficial 5 лет назад
You're welcome
@nimrahjavaid344
@nimrahjavaid344 Год назад
Jazakalllah
@shomusbiologyofficial
@shomusbiologyofficial Год назад
Thank you
@user-jl7so8rp3j
@user-jl7so8rp3j 11 месяцев назад
Relate proein perform PROCESSING SsDna
@mamtamishra6983
@mamtamishra6983 4 года назад
Sir DSB model in ecoli to aapne btaya h bt sir DSB in eukaryotes kese hota h and usme kon se enzymes use hote h
@june-df8ol
@june-df8ol 6 лет назад
very helpful and nice accent lol..?
@ashokparida6159
@ashokparida6159 Год назад
DSB5265
@carmelascorrano881
@carmelascorrano881 2 года назад
I love you
@jesminsultana1700
@jesminsultana1700 Год назад
Please make video in hindi language please , I face problems and I can't prepare this note properly 😭
@shomusbiologyofficial
@shomusbiologyofficial Год назад
Okay
@abhilashsharma9920
@abhilashsharma9920 4 года назад
Shi h
@shomusbiologyofficial
@shomusbiologyofficial 4 года назад
Thank you
@11diedo
@11diedo 4 года назад
I don't understand your pronunciation makes difficult to understand.
@muqaddasamna9273
@muqaddasamna9273 Год назад
I'd suggest you speak hindi next time. it'd be easy for us and you.
@shomusbiologyofficial
@shomusbiologyofficial Год назад
Won't be easy for me
@mauriceaoun9824
@mauriceaoun9824 5 лет назад
What language is this
@amberrathor7287
@amberrathor7287 9 лет назад
Nothing helpful... Whatever you explained is all copied from the textbook content you referred... Molecular biology of the gene by Watson 5th edition Even one could go through the book only, its very easy to understand
@nifatjan760
@nifatjan760 5 лет назад
bookes sy nhi to kia asmaan sy layia ga😃😃
@ankitachowdhury5268
@ankitachowdhury5268 3 года назад
Pagal ho kya ??? It's so easy to understand....
@alicedsouza2528
@alicedsouza2528 8 лет назад
please work on your pronounciation
@manuelflores3967
@manuelflores3967 6 лет назад
en chile decimos... ... a caballo regalado no se le mira el diente
@nifatjan760
@nifatjan760 5 лет назад
itz not english learning class so focus on concept not language....
@tachtoucho
@tachtoucho 6 лет назад
i guess if u work at a Call center u would be much more beneficial for the world !
@priyankaghosh7412
@priyankaghosh7412 7 лет назад
please work on your pronunciation.. its hard to follow!!!
@patriciamora2100
@patriciamora2100 10 лет назад
extremely bad hand writing? extremely bad english pronunciation!
@orangesky221
@orangesky221 9 лет назад
Wow. You know what really helps people understand biology? NOT racism.
@nshab09
@nshab09 6 лет назад
WOW.. such a hater.
@nehasathe7827
@nehasathe7827 5 лет назад
It's funny how you are complaining after being 4 minutes into the video. If you have such a problem with his english, don't watch the video. Its as simple as that.