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How to download sequencing data from SRA NCBI using windows SRA tool kit ? 

Dr. Asif's Mol. Biology
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#download #raw #ncbi #windows
In this video, I explained how to download Sequence read archives data to extract raw gene counts using the SRA tool kit.
*************LINKS**************
github.com/ncb...
fastq-dump --stdout -X 2 SRR390728
Genome-Wide analysis: • Genome-wide identifica...
Learn R with Dr. Asif's Mol. Biology: • Learn R with Dr. Asif
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Phylogenetic analysis: • Phylogenetic analysis
Experiment Tutorials: • Hands on performing ex...
If you have queries related to any video/research, please ask in the comments section of the relevant video, so that others can also get benefit from this discussion. [🛑🛑🛑If you are stuck with RNA-seq data analysis or need my help for postdoc/scholarship application: Book a live session: see the below-given link🛑🛑🛑]
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Опубликовано:

 

18 сен 2024

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Комментарии : 10   
@SubalakshmiKP-co8ni
@SubalakshmiKP-co8ni Месяц назад
Thank you so much sir, I was searching for the same in many videos but this is the one which helped me. Waiting for ur next video to download multiple files....
@asifmolbio
@asifmolbio Месяц назад
Glad if it is helping
@asifmolbio
@asifmolbio Месяц назад
Sure, i will record and upload foe multiple accessions as well
@strange5935
@strange5935 Месяц назад
thankyou soo much sir, i am working on single cell rna kindly make some video on it.
@asifmolbio
@asifmolbio Месяц назад
Sure, thanks for suggesting this topic
@asifmolbio
@asifmolbio Месяц назад
I will record
@shoaibgill-mq7rh
@shoaibgill-mq7rh Месяц назад
Informative ❤
@asifmolbio
@asifmolbio Месяц назад
Glad you like it
@DanielOliveira-bq9cm
@DanielOliveira-bq9cm Месяц назад
What should I do if the interactive screen doesn't appear?
@asifmolbio
@asifmolbio Месяц назад
I have also responded to you via email. Please share the code you tried and let me know if you are using Windows?
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