Тёмный
No video :(

How to interpret the results of proteomics data analysis? Proteomics Data interpretation 

Dr. Asif's Mol. Biology
Подписаться 12 тыс.
Просмотров 11 тыс.
50% 1

#howtointerpret #proteomics #interpretation
In this video, I have explained how we interpret the data proteomics from basic, and provided a practical guide on how the conclusion from figures and visualizations can be written well.
Review article: A practical guide to interpreting and generating bottom-up proteomics data visualizations
DOI: 10.1002/pmic.202100103
🔴 Subscribe to Dr. Asif’s Mol. Biology RU-vid channel: / @asifmolbio
🔴If you are a graduate student and trying to learn something new in easy way, Watch my playlists
Scientific writing Skills : • Sci-Writing Skills
Web-based tools and concepts : • Web-based tools and co...
Transcriptomics & Proteomics : • Transcriptomics & Prot...
Phylogenetic analysis : • Phylogenetic analysis
Experiment Tutorials : • Experiment Tutorials
Writing Tips for scholarships and postdocs: • Writing Tips for schol...
If you have queries related to any video/research, please ask in the comments section of the relevant video, so that others can also get benefit from this discussion. [🛑🛑🛑If you are stuck with RNA-seq data analysis or need my help for postdoc/scholarship application: Book a live session: see the below-given link🛑🛑🛑]
🔴 IMPORTANT LINKS 🔴
Book a session with Dr. Asif: forms.office.c...
Prices for live session: ibb.co/89M8Tdh
Facebook: / drasifmolbiology
Twitter: / asifmolbio
Instagram: / asifmolbio
ORCID: orcid.org/0000...

Опубликовано:

 

21 авг 2024

Поделиться:

Ссылка:

Скачать:

Готовим ссылку...

Добавить в:

Мой плейлист
Посмотреть позже
Комментарии : 24   
@armankulyyassov
@armankulyyassov 8 месяцев назад
In fact, SILAC, TMT, and other methods use stable (non-radioactive ) isotopes with 13C and 15N en.wikipedia.org/wiki/Stable_isotope_labeling_by_amino_acids_in_cell_culture (5:17 min)
@asifmolbio
@asifmolbio 8 месяцев назад
Sorry what i mean is the use of isotopes
@amrghit
@amrghit 8 месяцев назад
Thank you so much for this helpful video. Please is there a book allow me to understand these figures and how to create them??
@asifmolbio
@asifmolbio 8 месяцев назад
There is no book but review article you can find online
@meemmerani
@meemmerani Год назад
Nice 👍🏻
@asifmolbio
@asifmolbio Год назад
Glad you like it
@aiswariyaramesh6998
@aiswariyaramesh6998 2 месяца назад
Sir, is it possible to use volcano plot for proteins obtained in a single set of control and treatment whole cell proteomics data
@asifmolbio
@asifmolbio 2 месяца назад
Its possible
@teodoralukic24
@teodoralukic24 Год назад
Thank you a lot for your videos! :) It would be nice if you can make an interpretation of RNA seq and ChIP data soon. :)
@asifmolbio
@asifmolbio Год назад
Thanks, Teodora, Please note RNA seq data interpretation videos are already uploaded on my channel.
@asifmolbio
@asifmolbio Год назад
How to calculate FC, log2FC, Pvalue, Padj, Up/down genes in RNA seq data using Excel ru-vid.com/video/%D0%B2%D0%B8%D0%B4%D0%B5%D0%BE-HH3Mll4W5WE.html How to find genes of interest in RNA-seq / transcriptomic data ? Kegg pathway ru-vid.com/video/%D0%B2%D0%B8%D0%B4%D0%B5%D0%BE-LeNjskbF8RY.html Interpretation of Principal component analysis (PCA) in RNA seq ru-vid.com/video/%D0%B2%D0%B8%D0%B4%D0%B5%D0%BE-aUOV7EBGOy8.html How to select genes for qPCR validation in transcriptome/RNA seq data? ru-vid.com/video/%D0%B2%D0%B8%D0%B4%D0%B5%D0%BE-PRhHBcjKAKU.html How to interpret the results of KEGG pathway analysis? ru-vid.com/video/%D0%B2%D0%B8%D0%B4%D0%B5%D0%BE-meTGfLVBiRs.html How to write and interpret gene ontology (GO) in research articles ? ru-vid.com/video/%D0%B2%D0%B8%D0%B4%D0%B5%D0%BE-kRt2IWfhCqU.html Interpretation of RNA-seq heat maps ru-vid.com/video/%D0%B2%D0%B8%D0%B4%D0%B5%D0%BE-cRT5mpGMDmQ.html Interpretation of RNA seq data | DEGs | GO | KEGG ru-vid.com/video/%D0%B2%D0%B8%D0%B4%D0%B5%D0%BE-xc2zEI_5pmw.html You can watch them in reverse order, last one first and watch one by one while moving up. Hope you will get answers.
@ohikana4970
@ohikana4970 Год назад
Salam. Is there a certain website for proteomics data analysis? These figures are very nice but seems like they are using Phyton programming to generate them. Thank you
@asifmolbio
@asifmolbio Год назад
Yes there are websites, and these figures are generated through python. Their code are available (on Git Hub) and free to use.
@ohikana4970
@ohikana4970 Год назад
@@asifmolbio Can you share the websites please? I know ShinyGo from you. I have no experience in Phyton
@birrabukhari3836
@birrabukhari3836 Год назад
Sir, My question is how to analyse protein data? is there any platform like iDEP where we can analyse the proteomics data? Kindly guide me regarding that. Thank you.
@asifmolbio
@asifmolbio Год назад
Yes there are but its paid, but differential analysis can be done freely
@birrabukhari3836
@birrabukhari3836 Год назад
@@asifmolbio Sir, Kindly make a video on how to analyze protein as well.
@birrabukhari3836
@birrabukhari3836 Год назад
How to do differential analysis free for protein?
@saboorahmad316
@saboorahmad316 Год назад
Thank you. Sir any tutorial video about MxQuant software for phospho data?
@asifmolbio
@asifmolbio Год назад
Thanks saboor, i have noted down your suggestion. Please stay tuned.
@parthibanpana9905
@parthibanpana9905 Год назад
thank you for your wonderful videos,..sir, please do one video for metabolomics data
@asifmolbio
@asifmolbio Год назад
Soon inshaAllah , stay in touch
@chandanmahata5241
@chandanmahata5241 10 месяцев назад
Thank you for the information. May I have your email id, please. I have several queries regarding proteomics analysis.
@asifmolbio
@asifmolbio 10 месяцев назад
asifalikalas@foxmail.com
Далее
СЛАДКОЕЖКИ ПОЙМУТ😁@andrey.grechka
00:11
How to interpret the results of KEGG pathway analysis?
17:21
Proteomics Data analysis Using DIA-NN
14:55
Просмотров 3,9 тыс.