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Transcription Termination in Prokaryotes 

Hussain Biology
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Two classes of transcription terminators, Rho-dependent and Rho-independent, have been identified throughout prokaryotic genomes. These widely distributed sequences are responsible for triggering the end of transcription upon normal completion of gene or operon transcription, mediating early termination of transcripts as a means of regulation such as that observed in transcriptional attenuation, and to ensure the termination of runaway transcriptional complexes that manage to escape earlier terminators by chance, which prevents unnecessary energy expenditure for the cell.
Rho-dependent terminators
Rho-dependent transcription terminators require a protein called Rho factor, which exhibits RNA helicase activity, to disrupt the mRNA-DNA-RNA polymerase transcriptional complex. Rho-dependent terminators are found in bacteria and phage. The Rho-dependent terminator occurs downstream of translational stop codons and consists of an unstructured, cytosine-rich sequence on the mRNA known as a Rho utilization site (rut) for which a consensus sequence has not been identified, and a downstream transcription stop point (tsp). The rut serves as a mRNA loading site and as an activator for Rho; activation enables Rho to efficiently hydrolyze ATP and translocate down the mRNA while it maintains contact with the rut site. Rho is able to catch up with the RNA polymerase, which is stalled at the downstream tsp sites.[1] Contact between Rho and the RNA polymerase complex stimulates dissociation of the transcriptional complex through a mechanism involving allosteric effects of Rho on RNA polymerase.
Rho Dependent
Intrinsic transcription terminators or Rho-independent terminators require the formation of a self-annealing hairpin structure on the elongating transcript, which results in the disruption of the mRNA-DNA-RNA polymerase ternary complex. The terminator sequence in DNA contains a 20 basepair GC-rich region of dyad symmetry followed by a short poly-T tract or "T stretch" which is transcribed to form the terminating hairpin and a 7-9 nucleotide "U tract" respectively.
The hairpin formation causes RNA polymerase stalling and destabilisation, leading to a greater likelihood that dissociation of the complex will occur at that location due to an increased time spent paused at that site and reduced stability of the complex.

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14 окт 2024

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@@hussainbiology Sir which book do you refer for getting all these information ,please list the sources please sir
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i have my proff in half a month & i always felt like this topic was challenging but you've made it quite simple!! thanks
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Short video but with best explanations... jzakllahu khair bro..keep it up
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MashaAllah Bhut khub explanation Allah aapko jazayekhair ata farmaye. Aap aur kamyabi hasil kren
@hussainbiology
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shukriya
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literally made me understand an entire chapter within 5 minutes :) defs gonna help me in my exam
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FANTASTIC VIDEO! SIMPLE AND CLEAR...THANK YOU!!!!
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@partibhapanchal7030
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Amazing efforts 👏👏. The termination part of central dogma processes always create a blur image in my brain via book reading. But your video visuals made it crystal clear. A big thank you for such beautiful explanation.
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@anilchoudhary2813
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Sir...great explaination...it help me..in gettting a goood and easy understandable diagram... And memorize easliy....thanks...u sir...u are really..doing great for us
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Such a wonderful and easy description..........loved it.
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Thank you so much 😀
@deepinto8281
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Thank you, professor, for the nice and powerful lecture! Additionally, I would like to suggest including references for the information mentioned. When self-studying, reading some papers about the concepts discussed in the lecture can be helpful for gaining a deeper understanding. (This is just my opinion!)
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thank you! I hope everything good in life comes your way! Truly.
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thanks for appreciation
@user-lk2rz1qb4u
@user-lk2rz1qb4u Год назад
Could you teach me how rho factor how does the rho factor catch up with the moving RNA polymerase? As long as the RNA polymerase is running, I think the rho factor can't keep up with the polymerase.
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sir ... Your lectures are outstanding 👍👍
@hussainbiology
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Keep watching
@UltimateGuardian
@UltimateGuardian 7 месяцев назад
Thankyou for the clarification.
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Thanks for the great video! I could not grasp this from the book
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Perfect for last minute revision! This is truly a godsend!
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Watched dr najeeb,but its here that i understood it, thx a lot!!
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I cant thank u enough for making these wonderful videos.......u r the best....!!!!!!
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SUPERB WAY OF TEACHING 👌
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@hussainbiology 4 года назад
thanks for appreciation...Glad to know that it helps ✌️
@JRB-np2ll
@JRB-np2ll 4 года назад
Good video..especially thanks for the breif description note.. It will be very helpful if you give little more explanation in the description
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thanks for appreciation..Glad to know that it helps
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u saved my biochemistry final exam :) Great work, keep it up!
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Thank you for this video. It was excellent. Visually easy to follow, clear explanations!
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Great work...very informative lecture in just 4 mins...
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@zaroonhaider9813
@zaroonhaider9813 4 года назад
Excellent explanation❤❤❤❤Lots of prayers and respect❤❤
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@hussainbiology 4 года назад
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@Dagobert269
@Dagobert269 10 месяцев назад
Very nice and clear video thx so much
@tamannatripathy7643
@tamannatripathy7643 2 года назад
Love this explaination. Thank you so much❤️❤️.
@hussainbiology
@hussainbiology 2 года назад
thanks for appreciation..Glad it helps ✌️
@teboho8339
@teboho8339 Год назад
Thank you, God bless
@HectixShorts
@HectixShorts 2 года назад
Definitely a good description. Thanks
@lakshmeesha.nagendra3542
@lakshmeesha.nagendra3542 4 года назад
Well precised explanation sir...thank you sir...
@hussainbiology
@hussainbiology 4 года назад
thanks for appreciation..Glad to know that it helps ✌️
@Mae-rr5ye
@Mae-rr5ye 11 месяцев назад
This video was amazing. Thank you!
@hussainbiology
@hussainbiology 3 месяца назад
thanks for appreciation..Glad it helps..
@sreenathm7286
@sreenathm7286 3 года назад
2:14, Plandrome is not the appropriate word (reason), it is because of the 2 inverted repeats separated by about 6 bases on 3'-5' strand(RNA template). Your vedios are extremely useful, great job! keeping it up..man!!!
@hussainbiology
@hussainbiology 3 года назад
okay... Thanks for appreciation..Glad it helps
@sanzedtaief
@sanzedtaief 3 года назад
It was really helpful sir, please don’t stop making these videos.
@hussainbiology
@hussainbiology 3 года назад
thanks Sanzed for appreciation... Glad it helps
@luabastos1493
@luabastos1493 3 года назад
Your videos are helping me a lot. They're so clarifying, thank you a lot! :-)
@hussainbiology
@hussainbiology 3 года назад
most welcome..✌️
@mariannamusella4822
@mariannamusella4822 4 года назад
Thank you for this video, you've made that very clear and sintetic. Just what I needed
@hussainbiology
@hussainbiology 4 года назад
thanks for appreciation..Glad to know that it helps ✌️
@amrkaid6832
@amrkaid6832 5 лет назад
i love u man , helped me alot before my genetics med exam
@hussainbiology
@hussainbiology 4 года назад
Thanks for appreciation...Glad to know that it helps.
@MawadaAlfatih-pz2xc
@MawadaAlfatih-pz2xc 8 месяцев назад
You saved me soo much time Thank you very much
@HARISANKARSS1993
@HARISANKARSS1993 4 года назад
lucid and critical explanation. Thanks a lot
@hussainbiology
@hussainbiology 4 года назад
thanks for appreciation..Glad to know that it helps
@hazelmercado6370
@hazelmercado6370 3 года назад
This short video is more helpful than my teacher's two and half hour talk -_- ... Anyways I like your videos very much!
@hussainbiology
@hussainbiology 3 года назад
thanks Hazel for appreciation
@Isumi03
@Isumi03 2 года назад
You saved my semester❤️ thank you so much🙆
@hussainbiology
@hussainbiology 2 года назад
thanks for appreciation.. Glad to know that it helps
@rafaqatrehman3883
@rafaqatrehman3883 5 лет назад
Very beneficial
@YUVATHEESWARANR
@YUVATHEESWARANR 2 года назад
thank you sir your class are clearly understand
@belarbiania7067
@belarbiania7067 5 лет назад
Amazing explanation i finally understood that thanks to you our amazing teacher!
@hussainbiology
@hussainbiology 4 года назад
thanks for appreciation...Glad to know that it helps
@taranehdaryaee2385
@taranehdaryaee2385 3 года назад
This is BEAUTIFUL! But when does rho dependent occur? How does the rho-factor "know" when to bind to the rut site?
@hussainbiology
@hussainbiology 3 года назад
thanks for appreciation.... I am yet to find the specific answer but this article may help you....www.ncbi.nlm.nih.gov/pmc/articles/PMC1838574/
@Min-vd1pf
@Min-vd1pf 4 года назад
Please put english caption (not auto generated) because this is an educational video and some words cant be understood by some viewers
@gyaneshshukla6884
@gyaneshshukla6884 2 года назад
But when does the RHO reach the RNA-DNA hybrid point? Is there any specific sequence? There has to be some reason why and when rho reaches the junction and releases the rna.
@nifatjan7458
@nifatjan7458 5 лет назад
It helps a loooooooooooooot......thank you sooooooo much sir....
@hussainbiology
@hussainbiology 5 лет назад
thanks Nifat for appreciation.....Glad to know that it helps
@muhammadabdulgafoor2361
@muhammadabdulgafoor2361 5 месяцев назад
Amazing work!
@hussainbiology
@hussainbiology 4 месяца назад
Thank you! Cheers!
@siddikaattar1928
@siddikaattar1928 2 года назад
Thank you sir. These was very helpful video for our exam.
@hussainbiology
@hussainbiology 2 года назад
thanks for appreciation..Glad it helps....✌️
@chandanaranga
@chandanaranga 5 лет назад
Thank u for making this video so easy to understand🙏...but I have a doubt ,in the rho independent transcription what is the necessity of forming a hairpin loop if there is a presence of termination gene in the DNA and the second one is, in rho dependent termination don't the DNA contain termination unit in it...please clarify my doubts
@hussainbiology
@hussainbiology 5 лет назад
rho independent termination is CIS acting regulation. The loop that stalls the Polymerase is the Cis Acting element that are present within the DNA molecule on which the transcription is going on. So to conserve the energy why to hire the rho proteins to stop the transcription when prokaryotes can terminate on its own by forming loop.
@chandanaranga
@chandanaranga 5 лет назад
@@hussainbiology thank u very much for replying ...I have one more doubt that I want to get clear with...as u mentioned in the video about rho independent termination it requires A:T content to terminate the process then what is the necessity of forming a hairpin loop to terminate the process...please clarify me in that.
@hussainbiology
@hussainbiology 5 лет назад
@@chandanarangaNot only A:T but also any base which complementary pairs with other in the same strand. the loop formed so physically stalls the Polymerase enzyme and then transcription terminates.
@chandanaranga
@chandanaranga 5 лет назад
@@hussainbiology Thank u soo much 😊😊
@LuckyLoL13
@LuckyLoL13 5 лет назад
@@chandanaranga This is not te full story. The hairpin widens the RNA exit channel and loosens the RNA polymerase clamp. The hairpin does indeed also promote the stalling of the polymerase, but this is very insignificant, as the poly A region alone will slow the polymerase down to a very significant degree
@anushaambati1673
@anushaambati1673 4 года назад
Excellently explained 👍👍
@hussainbiology
@hussainbiology 4 года назад
Thanks for appreciation.. keep sharing and supporting ✌️
@fs5297
@fs5297 3 года назад
JazakAllahu Khairan ✨
@hussainbiology
@hussainbiology 3 года назад
✌️✌️✌️..
@angelelsa5133
@angelelsa5133 2 года назад
Thank you so much 💖💖👍👍
@anna-kb9mn
@anna-kb9mn 5 лет назад
You are amazing! explained it so clear and simple
@hussainbiology
@hussainbiology 5 лет назад
thanks Anna for appreciation... Glad to know that it helps
@farozanmidhat6859
@farozanmidhat6859 3 года назад
Well explained sir...it helped me alot
@hussainbiology
@hussainbiology 3 года назад
thanks for appreciation
@UsmanKhalid-xo9bn
@UsmanKhalid-xo9bn 11 месяцев назад
Superb lecture
@smdr5576
@smdr5576 3 года назад
amazing, thank you so much! all the best
@hussainbiology
@hussainbiology 3 года назад
You are welcome
@preyakumari5612
@preyakumari5612 3 года назад
Thanku sir.... Ur all videos are really amazing 🙏it's very helpful to me
@hussainbiology
@hussainbiology 3 года назад
thanks for appreciation..Glad to know that it helps ✌️
@katerinakochmannova8562
@katerinakochmannova8562 3 года назад
Thank you!! Super useful!
@hussainbiology
@hussainbiology 3 года назад
Most welcome. ✌️
@poorna.2579
@poorna.2579 10 месяцев назад
Thank you sir🎉
@hussainbiology
@hussainbiology 10 месяцев назад
Most welcome
@efeucar2115
@efeucar2115 3 года назад
That helped my study a lot, thanks sir :))
@hussainbiology
@hussainbiology 3 года назад
thanks for appreciation... glad it helps
@moumitamallick5426
@moumitamallick5426 4 года назад
Great explanation, thanks a lot
@chibrina
@chibrina 2 года назад
Nice video!
@medico958
@medico958 4 года назад
Thanq and I’am ready for tomorrow’s exam 🙋🏻‍♀️🙋🏻‍♀️🙋🏻‍♀️
@hussainbiology
@hussainbiology 4 года назад
thanks for appreciation..Glad to know that it helps
@aitch811
@aitch811 Год назад
يزاك الله خير
@gamerplus9633
@gamerplus9633 3 года назад
Keep going man thank you!!!
@hussainbiology
@hussainbiology 3 года назад
thanks for appreciation
@shahrzadhesamiarani8758
@shahrzadhesamiarani8758 Год назад
Thanks a lot 🌷👌👏
@daisysviews
@daisysviews 3 года назад
GREAT VIDEO
@hussainbiology
@hussainbiology 3 года назад
thanks for appreciation
@ridajaved9502
@ridajaved9502 3 года назад
Why rho independent termination has poly A sequence and rho dependent not?
@ngnhunghia
@ngnhunghia 3 года назад
Thank you so much! This video is very helpful to me! Have a nice day
@justinelecluselle8475
@justinelecluselle8475 4 года назад
Great Video!
@hussainbiology
@hussainbiology 4 года назад
thanks for appreciation...Glad to know that it helps ✌️
@die_tolleteekanne2251
@die_tolleteekanne2251 Год назад
Very decent video, thanks alot
@hussainbiology
@hussainbiology Год назад
Glad you liked it!
@shannonhatch7
@shannonhatch7 4 года назад
That was very helpful. Thank you!
@hussainbiology
@hussainbiology 4 года назад
thanks for appreciation
@sunshine2741
@sunshine2741 4 года назад
Thank you !💛💛💛
@hussainbiology
@hussainbiology 4 года назад
thanks for appreciation...Glad to know that it helps ✌️
@sinediis5420
@sinediis5420 3 года назад
Very clear, thank you!
@steffivarghese3445
@steffivarghese3445 4 года назад
Thank youuu it was an excellent explanation!!!
@hussainbiology
@hussainbiology 4 года назад
Thanks for appreciation
@verma-pi1pm
@verma-pi1pm 3 месяца назад
This is super awesome ❤❤
@estherruth2781
@estherruth2781 3 года назад
U didn't talk about RNAP in the Rho dependent termination..
@ankithasajeev7184
@ankithasajeev7184 Год назад
I have a doubt sir , the strand of RNA that transcribed 5 prime to 3 prime bt here 3 prime to 5 prime are choosen . Hw is it possible sir
@cozys5516
@cozys5516 3 года назад
rho dependent strand is not having poly u sequence?
@edu-rt2m
@edu-rt2m 3 года назад
Wowe sir.. Fan bn gyi
@hussainbiology
@hussainbiology 3 года назад
great.. glad to know that
@Abdullah-nc2vd
@Abdullah-nc2vd 5 лет назад
Thanks
@anythingcreativeme4523
@anythingcreativeme4523 2 года назад
thank you , great video
@dazzlingtripathi491
@dazzlingtripathi491 3 года назад
Keep it up👍🏻
@hussainbiology
@hussainbiology 3 года назад
thanks for appreciation
@user8582
@user8582 3 года назад
AMAZING
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