How to Create Simple Molecular Dynamics Simulations in Chimera 

Thank you for your video. Very helpful! I really like your voice, very clear and melodious！

Hi ! Thanks for your video. I'm currently working on the self assembly of a small molecule which is an alkyl amide that self assemble through H-bonding between amide groups. Do you know if it possible with Chimera to generate the 2 molecules, minimize the structure of the two and then calculating and visualizing the H-bonds ? Thank you so much for your help !

Hello , can you explain how to do MD 10nm for a constructed model ?

I'm over here trying to run a 9 peptide simulation and the pc can't handle