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How to mutate a protein in UCSF Chimera? 

Mohamed shehata
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This video explains how to modify and mutate a protein with software chimera

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24 авг 2024

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Комментарии : 10   
@yaneve_t
@yaneve_t 2 месяца назад
Very helpful, thank you so much
@amkhalil256
@amkhalil256 3 месяца назад
Thank you, Mohamed for your tutorials! As a beginner in structural biology, do you recommend Pymol or Chimera? Also, I would appreciate if you can recommend some links for basics to help in structural biology.
@Mohamedshehata
@Mohamedshehata 3 месяца назад
Depends but you can start with VMD
@vanessagallegom
@vanessagallegom 6 месяцев назад
Hi, it is the same procedure to complete a sequence? do you know any route that I can use to complete the sequence in Chimera and save it as a new PDB?
@marvell6059
@marvell6059 Год назад
Thank you so much for the video
@Mohamedshehata
@Mohamedshehata Год назад
🥰
@abdelmoujoudfaris1162
@abdelmoujoudfaris1162 Год назад
How do we choose the favorable residue, the residue that we are going to change?
@cstudies3397
@cstudies3397 2 года назад
Thank you for the video. Do you have any videos on calculating the binding free energy of a protein-protein complex in VMD? I have run NAMD simulations on a protein-protein complex and would like to compute the binding free energy of this interaction
@alveatasneem8527
@alveatasneem8527 2 года назад
Try CaFE vmd plugin tool
@lisamakedon7034
@lisamakedon7034 Год назад
Hello, could you please tell which version of Chimera did you use foe this video?
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